SrasV1, Main, Exploration, bibRecord, 004450

Full-length genome sequences of two SARS-like coronaviruses in horseshoe bats and genetic variation analysis

Identifieur interne : 004450 ( Main/Exploration ); précédent : 004449; suivant : 004451

Full-length genome sequences of two SARS-like coronaviruses in horseshoe bats and genetic variation analysis

Source :

Journal of general virology [ 0022-1317 ] ; 2006.

RBID : Pascal:06-0518315

Descripteurs français

Pascal (Inist)
- Virus syndrome respiratoire aigu sévère, Chiroptera, Séquence nucléotide, Génétique, Microbiologie, Virologie.
Wicri :
- topic : Génétique.

English descriptors

KwdEn :
- Chiroptera, Genetics, Microbiology, Nucleotide sequence, Severe acute respiratory syndrome virus, Virology.

Abstract

Bats were recently identified as natural reservoirs of SARS-like coronavirus (SL-CoV) or SARS coronavirus-like virus. These viruses, together with SARS coronaviruses (SARS-CoV) isolated from human and palm civet, form a distinctive cluster within the group 2 coronaviruses of the genus Coronavirus, tentatively named group 2b (G2b). In this study, complete genome sequences of two additional group 2b coronaviruses (G2b-CoVs) were determined from horseshoe bat Rhinolophus ferrumequinum (G2b-CoV Rf1) and Rhinolophus macrotis (G2b-CoV Rm1). The bat G2b-CoV isolates have an identical genome organization and share an overall genome sequence identity of 88-92 % among themselves and between them and the human/civet isolates. The most variable regions are located in the genes encoding nsp3, ORF3a, spike protein and ORF8 when bat and human/civet G2b-CoV isolates are compared. Genetic analysis demonstrated that a diverse G2b-CoV population exists in the bat habitat and has evolved from a common ancestor of SARS-CoV.

Affiliations:

Links toward previous steps (curation, corpus...)

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Le document en format XML

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<series><title level="j" type="main">Journal of general virology</title>
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<term>Genetics</term>
<term>Microbiology</term>
<term>Nucleotide sequence</term>
<term>Severe acute respiratory syndrome virus</term>
<term>Virology</term>
</keywords>
<keywords scheme="Pascal" xml:lang="fr"><term>Virus syndrome respiratoire aigu sévère</term>
<term>Chiroptera</term>
<term>Séquence nucléotide</term>
<term>Génétique</term>
<term>Microbiologie</term>
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<front><div type="abstract" xml:lang="en">Bats were recently identified as natural reservoirs of SARS-like coronavirus (SL-CoV) or SARS coronavirus-like virus. These viruses, together with SARS coronaviruses (SARS-CoV) isolated from human and palm civet, form a distinctive cluster within the group 2 coronaviruses of the genus Coronavirus, tentatively named group 2b (G2b). In this study, complete genome sequences of two additional group 2b coronaviruses (G2b-CoVs) were determined from horseshoe bat Rhinolophus ferrumequinum (G2b-CoV Rf1) and Rhinolophus macrotis (G2b-CoV Rm1). The bat G2b-CoV isolates have an identical genome organization and share an overall genome sequence identity of 88-92 % among themselves and between them and the human/civet isolates. The most variable regions are located in the genes encoding nsp3, ORF3a, spike protein and ORF8 when bat and human/civet G2b-CoV isolates are compared. Genetic analysis demonstrated that a diverse G2b-CoV population exists in the bat habitat and has evolved from a common ancestor of SARS-CoV.</div>
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<name sortKey="Wuze Ren" sort="Wuze Ren" uniqKey="Wuze Ren" last="Wuze Ren">WUZE REN</name>
<name sortKey="Yang Zhong" sort="Yang Zhong" uniqKey="Yang Zhong" last="Yang Zhong">YANG ZHONG</name>
<name sortKey="Yuan Zhang" sort="Yuan Zhang" uniqKey="Yuan Zhang" last="Yuan Zhang">YUAN ZHANG</name>
<name sortKey="Zhengli Shi" sort="Zhengli Shi" uniqKey="Zhengli Shi" last="Zhengli Shi">ZHENGLI SHI</name>
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<country name="Australie"><noRegion><name sortKey="Meng Yu" sort="Meng Yu" uniqKey="Meng Yu" last="Meng Yu">MENG YU</name>
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<name sortKey="Wang, Lin Fa" sort="Wang, Lin Fa" uniqKey="Wang L" first="Lin-Fa" last="Wang">Lin-Fa Wang</name>
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   |texte=   Full-length genome sequences of two SARS-like coronaviruses in horseshoe bats and genetic variation analysis
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Full-length genome sequences of two SARS-like coronaviruses in horseshoe bats and genetic variation analysis

Full-length genome sequences of two SARS-like coronaviruses in horseshoe bats and genetic variation analysis

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